multinomial probit model
Bayesian Inference for the Multinomial Probit Model under Gaussian Prior Distribution
Fasano, Augusto, Rebaudo, Giovanni, Anceschi, Niccolò
Multinomial probit (mnp) models are fundamental and widely-applied regression models for categorical data. Fasano and Durante (2022) proved that the class of unified skew-normal distributions is conjugate to several mnp sampling models. This allows to develop Monte Carlo samplers and accurate variational methods to perform Bayesian inference. In this paper, we adapt the abovementioned results for a popular special case: the discrete-choice mnp model under zero mean and independent Gaussian priors. This allows to obtain simplified expressions for the parameters of the posterior distribution and an alternative derivation for the variational algorithm that gives a novel understanding of the fundamental results in Fasano and Durante (2022) as well as computational advantages in our special settings.
A Class of Conjugate Priors for Multinomial Probit Models which Includes the Multivariate Normal One
Fasano, Augusto, Durante, Daniele
Multinomial probit models are widely-implemented representations which allow both classification and inference by learning changes in vectors of class probabilities with a set of p observed predictors. Although various frequentist methods have been developed for estimation, inference and classification within such a class of models, Bayesian inference is still lagging behind. This is due to the apparent absence of a tractable class of conjugate priors, that may facilitate posterior inference on the multinomial probit coefficients. Such an issue has motivated increasing efforts toward the development of effective Markov chain Monte Carlo methods, but state-of-the-art solutions still face severe computational bottlenecks, especially in large p settings. In this article, we prove that the entire class of unified skew-normal (SUN) distributions is conjugate to a wide variety of multinomial probit models, and we exploit the SUN properties to improve upon state-of-art-solutions for posterior inference and classification both in terms of closed-form results for key functionals of interest, and also by developing novel computational methods relying either on independent and identically distributed samples from the exact posterior or on scalable and accurate variational approximations based on blocked partially-factorized representations. As illustrated in a gastrointestinal lesions application, the magnitude of the improvements relative to current methods is particularly evident, in practice, when the focus is on large p applications.
MPBART - Multinomial Probit Bayesian Additive Regression Trees
Kindo, Bereket P., Wang, Hao, Peña, Edsel A.
This article proposes Multinomial Probit Bayesian Additive Regression Trees (MPBART) as a multinomial probit extension of BART - Bayesian Additive Regression Trees (Chipman et al (2010)). MPBART is flexible to allow inclusion of predictors that describe the observed units as well as the available choice alternatives. Through two simulation studies and four real data examples, we show that MPBART exhibits very good predictive performance in comparison to other discrete choice and multiclass classification methods. To implement MPBART, we have developed an R package mpbart available freely from CRAN repositories.